Recent Publications

EIAV

  1. Baccam P, Thompson R J, Li Y, Sparks W O, Belshan M, Dorman K S, Wannemuehler Y, Oaks J L, Cornette J L, Carpenter S. (2003) Subpopulations of equine infectious anemia virus Rev coexist in vivo and differ in phenotype. Journal of Virology. 77(22):12122-12131.

Recombination

  1. Suchard M A, Weiss R E, Sinsheimer J S, Dorman K S, Patel M, McCabe E R B. (2003) Evolutionary Similarity Among Genes. Journal of the American Statistical Association. 98(463):653-662.
  2. Suchard M A, Weiss R E, Dorman K S, Sinsheimer J S. (2003) Inferring Spatial Phylogenetic Variation Along Nucleotide Sequences: A Multiple Changepoint Model. Journal of the American Statistical Association. 98(462):427-437.
  3. Suchard M A, Weiss R E, Dorman K S, Sinsheimer J S. (2002) Oh brother, where art thou? A Bayes factor test for recombination with uncertain heritage. Systematic Biology. 51(5):715-728.
  4. Dorman K S, Kaplan A H, Sinsheimer J S. (2002) Bootstrap Confidence Levels for HIV-1 Recombination. Journal of Molecular Evolution. 54(2):200-209. (info)

HIV

  1. Dorman K S, Kaplan A H, Lange K, Sinsheimer J S. (2000) Mutation takes no vacation: can structured treatment interruptions increase the risk of drug-resistant HIV-1? Journal of Acquired Immune Deficiency Syndrome. 25(5):398-402. (info)
  2. Dorman K S. (2001) Dissertation: Human Immunodeficiency Virus Type 1 Genome Variability - Recombination and Emergence of Resistance. UCLA

Phylogenetics

  1. Patel M, Dorman K S, Zhang Y-H, Huang B-L, Arnold A P, Sinsheimer J S, Vilain E B, McCabe E R B. (2001) Primate DAX1, SRY, and SOX9: evolutionary stratification of sex-determination pathway. American Journal of Human Genetics. 68:275-280. (info)

Branching Processes

  1. Dorman, K S, Sinsheimer J S, and K Lange. (2004) In the garden of branching processes. SIAM Rev. In press. (preprint)